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4.5
Form of Warrant to Purchase Common Stock (Incorporated by reference to Exhibit 4.1 to the
Company’s Current Report on Form 8-K filed October 22, 2010)
*10.1
Amended and Restated Employment Agreement dated October 24, 2008, by and between the
Company and Jerry L. Peters (Incorporated by reference to Exhibit 10.1 of the Company’s Current
Report on Form 8-K, dated October 28, 2008)
*10.2
2007 Equity Incentive Plan (Incorporated by reference to Appendix A of the Company’s Definitive
Proxy Statement filed March 27, 2007)
10.3
Form of Indemnification Agreement (Incorporated by reference to Exhibit 10.53 of the Company’s
Registration Statement on Form S-4/A filed August 1, 2008)
*10.4(a)
Employment Agreement with Todd Becker (Incorporated by reference to Exhibit 10.54 of the
Company’s Registration Statement on Form S-4/A filed August 1, 2008)
*10.4(b)
Amendment No. 1 to Employment Agreement with Todd Becker, dated December 18, 2009.
(Incorporated by reference to Exhibit 10.7(b) of the Company’s Annual Report on Form 10-K filed
February 24, 2010)
10.5(a)
Construction/Permanent Mortgage Security Agreement, Assignment of Leases and Rents, Financing
Statement and Fixture Filing dated as of February 27, 2007 by Green Plains Bluffton LLC (f/k/a
Indiana Bio-Energy, LLC) in favor of AgStar Financial Services, PCA (Incorporated by reference to
Exhibit 10.48 of the Company’s Annual Report on Form 10-KT, dated March 31, 2009)
10.5(b)
Amended and Restated Master Loan Agreement, dated September 30, 2011, by and among Green
Plains Bluffton LLC and AgStar Financial Services, PCA (Incorporated by reference to Exhibit
10.06 of the Company’s Quarterly Report on Form 10-Q, filed November 1, 2011)
10.5(c)
First Amendment to Amended and Restated Master Loan Agreement, dated February 16, 2012, by
and among Green Plains Bluffton LLC and AgStar Financial Services, PCA
10.6(a)
Loan Agreement between City of Bluffton, Indiana and Green Plains Bluffton LLC (f/k/a Indian
Bio-Energy, LLC) dates as of March 1, 2007 (Incorporated by reference to Exhibit 10.46 of the
Company’s Annual Report on Form 10-KT, dated March 31, 2009)
10.6(b)
Indenture of Trust dated as of March 1, 2007 by and between the City of Bluffton, Indiana, Indiana
Bio-Energy, LLC (n/k/a Green Plains Bluffton LLC) and U.S. Bank National Association
(Incorporated by reference to Exhibit 10.47 of the Company’s Annual Report on Form 10-KT, dated
March 31, 2009)
10.6(c)
Subordinate Construction/Permanent Mortgage, Security Agreement, Assignment of Leases and
Rents, Financing Statement and Fixture Filing dated as of March 1, 2007 between Green Plains
Bluffton LLC (f/k/a Indiana Bio-Energy, LLC) and U.S. Bank National Association (Incorporated by
reference to Exhibit 10.49 of the Company’s Annual Report on Form 10-KT, dated March 31, 2009)
*10.7
Non-Statutory Stock Option Agreement between Steve Bleyl and Green Plains Renewable Energy,
Inc. dated October 15, 2008 (Incorporated by reference to Exhibit 10.50 of the Company’s Annual
Report on Form 10-KT, dated March 31, 2009)
*10.8
Non-Statutory Stock Option Agreement between Edgar Seward and Green Plains Renewable Energy,
Inc. dated October 15, 2008 (Incorporated by reference to Exhibit 10.51 of the Company’s Annual
Report on Form 10-KT, dated March 31, 2009)
*10.9
Non-Statutory Stock Option Agreement between Michael Orgas and Green Plains Renewable
Energy, Inc. dated November 1, 2008 (Incorporated by reference to Exhibit 10.52 of the Company’s
Annual Report on Form 10-KT, dated March 31, 2009)
*10.10
Employment Agreement by and between Green Plains Renewable Energy, Inc. and Michael C.
Orgas dated November 1, 2008 (Incorporated by reference to Exhibit 10.1 of the Company’s
Quarterly Report on Form 10-Q filed May 15, 2009)
*10.11
Employment Offer Letter to Edgar Seward dated October 15, 2008 (Incorporated by reference to
Exhibit 10.2 of the Company’s Quarterly Report on Form 10-Q filed May 15, 2009)
*10.12(a)
2009 Equity Incentive Plan (Incorporated by reference to Exhibit 10.1 of the Company’s Current
Report on Form 8-K dated May 11, 2009)